Transcript: lnc-CCZ1B-1:1

Basic information

LNCipedia transcript ID: lnc-CCZ1B-1:1 
LNCipedia gene ID: lnc-CCZ1B-1
Location (hg19): chr7:6833765-6836573
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 569 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000429267.1; AC073343.11-001; OTTHUMT00000324200.1; NONHSAT119072
Alternative gene names: ENSG00000226150.1; AC073343.11; OTTHUMG00000151859.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8399 non-coding 
CPAT coding probability 26.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCZ1B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCZ1B-1:1
4.0 lnc-CCZ1B-1:1
4.1 lnc-CCZ1B-1:1
5.0 lnc-CCZ1B-1:1
5.1 lnc-RNF216-23:2
5.2 lnc-CCZ1B-1:1