Transcript: lnc-CD36-7:1

Basic information

LNCipedia transcript ID: lnc-CD36-7:1 
LNCipedia gene ID: lnc-CD36-7
Ensembl Gene ID: ENSG00000237896
Ensembl Transcript ID: ENST00000431501
Location (hg19): chr7:80804824-80819706
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 715 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000431501.5
Alternative gene names: ENSG00000237896.6; AC005008.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -99.9582 non-coding 
CPAT coding probability 10.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD36-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC005008.2.1-7:1
4.1 lnc-AC005008.2.1-7:1
5.0 lnc-AC005008.2.1-7:1
5.1 lnc-FKBP6-127:1
5.2 lnc-CD36-7:1