Transcript: lnc-CD3D-8:1

Basic information

LNCipedia transcript ID: lnc-CD3D-8:1 
LNCipedia gene ID: lnc-CD3D-8
Ensembl Gene ID: ENSG00000255384
Ensembl Transcript ID: ENST00000532619
Location (hg19): chr11:118303836-118305921
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2086 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000532619.1
Alternative gene names: ENSG00000255384.1; RP11-770J1.4; AP001267.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.9722 non-coding 
CPAT coding probability 59.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD3D-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-770J1.4.1-4:1
4.1 lnc-RP11-770J1.4.1-4:1
5.0 lnc-RP11-770J1.4.1-4:1
5.1 lnc-SCN4B-17:1
5.2 lnc-CD3D-8:1