Transcript: lnc-CD46-5:5

Basic information

LNCipedia transcript ID: lnc-CD46-5:5 
LNCipedia gene ID: lnc-CD46-5
Location (hg19): chr1:208417854-208419232
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 725 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033294.1|MICT00000029512.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -126.6478 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD46-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CD46-5:5
5.0 lnc-CD46-5:5
5.1 lnc-SERTAD4-25:4
5.2 lnc-CD46-5:5