Transcript: lnc-CD46-6:1

Basic information

LNCipedia transcript ID: lnc-CD46-6:1 
LNCipedia gene ID: lnc-CD46-6
Location (hg19): chr1:207996253-208003650
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7398 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033166.1|ENCT00000016944.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.6393 non-coding 
CPAT coding probability 6.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD46-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CD46-6:1
5.0 lnc-CD46-6:1
5.1 lnc-CDK18-58:1
5.2 lnc-CD46-6:1