Transcript: lnc-CD5L-1:1

Basic information

LNCipedia transcript ID: lnc-CD5L-1:1 
LNCipedia gene ID: lnc-CD5L-1
Location (hg19): chr1:158012874-158014999
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 467 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_138_chr1:158012873-158014999_colon
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.8464 non-coding 
CPAT coding probability 7.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD5L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD5L-1:1
4.0 lnc-CD5L-1:1
4.1 lnc-CD5L-1:1
5.0 lnc-CD5L-1:1
5.1 lnc-PAQR6-38:1
5.2 lnc-CD5L-1:1