Transcript: lnc-CD99L2-2:3

Basic information

LNCipedia transcript ID: lnc-CD99L2-2:3 
LNCipedia gene ID: lnc-CD99L2-2
Location (hg19): chrX:150473504-150565538
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1226 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000114696.1|FTMT28900019264.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 50.3702 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD99L2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CD99L2-2:3
5.0 lnc-CD99L2-2:3
5.1 lnc-CTAG1B-63:2
5.2 lnc-CD99L2-2:3