Transcript: lnc-CDC42BPB-5:9

Basic information

LNCipedia transcript ID: lnc-CDC42BPB-5:9 
LNCipedia gene ID: lnc-CDC42BPB-5
Location (hg19): chr14:103670976-103673488
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1196 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022131.1|MICT00000110980.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.1864 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDC42BPB-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-736N17.6.1-5:4
5.0 lnc-RP11-736N17.6.1-5:4
5.1 lnc-CDC42BPB-5:4
5.2 lnc-CDC42BPB-5:9