Transcript: lnc-CDH4-4:4

Basic information

LNCipedia transcript ID: lnc-CDH4-4:4 
LNCipedia gene ID: lnc-CDH4-4
Location (hg19): chr20:59325536-59356638
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9447 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053886.1|MICT00000221456.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.7768 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH4-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDH4-4:4
5.0 lnc-CDH4-4:4
5.1 lnc-GNAS-20:3
5.2 lnc-CDH4-4:4