Transcript: lnc-CDH8-10:9

Basic information

LNCipedia transcript ID: lnc-CDH8-10:9 
LNCipedia gene ID: lnc-CDH8-10
Location (hg19): chr16:63172400-63651950
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 738 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260658.1|MICT00000133689.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.2579 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH8-10:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDH8-10:9
5.0 lnc-CDH8-10:9
5.1 lnc-PSMB10-57:7
5.2 lnc-CDH8-10:9