Transcript: lnc-CDH9-15:1

Basic information

LNCipedia transcript ID: lnc-CDH9-15:1 
LNCipedia gene ID: lnc-CDH9-15
Location (hg19): chr5:29177611-29179278
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 729 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2894_chr5:29177610-29179278_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.3541 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDH9-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH9-15:1
4.0 lnc-CDH9-15:1
4.1 lnc-CDH9-15:1
5.0 lnc-CDH9-15:1
5.1 lnc-CDH12-63:1
5.2 lnc-CDH9-15:1