Transcript: lnc-CDK11A-2:5

Basic information

LNCipedia transcript ID: lnc-CDK11A-2:5 
LNCipedia gene ID: lnc-CDK11A-2
Location (hg19): chr1:1635789-1640315
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 976 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT000353
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 391.7609 coding 
CPAT coding probability 97.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDK11A-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35E2B-2:4
4.0 lnc-CDK11A-2:5
4.1 lnc-CDK11A-2:5
5.0 lnc-CDK11A-2:5
5.1 lnc-CLSTN1-129:8
5.2 lnc-CDK11A-2:5