Transcript: lnc-CDK20-15:1

Basic information

LNCipedia transcript ID: lnc-CDK20-15:1 
LNCipedia gene ID: lnc-CDK20-15
Location (hg19): chr9:90326052-90326888
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 837 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000108906.1|FTMT23400006598.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.8354 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDK20-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDK20-15:1
5.0 lnc-CDK20-15:1
5.1 lnc-SEMA4D-46:1
5.2 lnc-CDK20-15:1