Transcript: lnc-CDK5RAP2-1:2

Basic information

LNCipedia transcript ID: lnc-CDK5RAP2-1:2 
LNCipedia gene ID: lnc-CDK5RAP2-1
Location (hg19): chr9:123334025-123342448
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 546 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134509
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -169.2583 non-coding 
CPAT coding probability 37.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDK5RAP2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEGF9-1:6
4.0 lnc-CDK5RAP2-1:2
4.1 lnc-CDK5RAP2-1:2
5.0 lnc-CDK5RAP2-1:2
5.1 lnc-BRINP1-8:1
5.2 lnc-CDK5RAP2-1:2