Transcript: lnc-CDO1-3:1

Basic information

LNCipedia transcript ID: lnc-CDO1-3:1 
LNCipedia gene ID: lnc-CDO1-3
Location (hg19): chr5:115176249-115177256
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 553 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT103335
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 488.5643 coding 
CPAT coding probability 26.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CDO1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDO1-1:4
4.0 lnc-CDO1-3:1
4.1 lnc-CDO1-3:1
5.0 lnc-CDO1-3:1
5.1 lnc-LOX-98:1
5.2 lnc-CDO1-3:1