Transcript: lnc-CDR2-8:1

Basic information

LNCipedia transcript ID: lnc-CDR2-8:1 
LNCipedia gene ID: lnc-CDR2-8
Location (hg19): chr16:22186451-22202645
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 925 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028923.1|ENCT00000164976.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.7802 non-coding 
CPAT coding probability 6.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDR2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDR2-8:1
5.0 lnc-CDR2-8:1
5.1 lnc-SULT1A2-213:1
5.2 lnc-CDR2-8:1