Transcript: lnc-CDR2-8:2

Basic information

LNCipedia transcript ID: lnc-CDR2-8:2 
LNCipedia gene ID: lnc-CDR2-8
Location (hg19): chr16:22195316-22202645
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4167 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028923.1|ENCT00000164980.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.9615 non-coding 
CPAT coding probability 5.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDR2-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CDR2-8:2
5.0 lnc-CDR2-8:2
5.1 lnc-SULT1A2-213:3
5.2 lnc-CDR2-8:2