Transcript: lnc-CEACAM21-5:4

Basic information

LNCipedia transcript ID: lnc-CEACAM21-5:4 
LNCipedia gene ID: lnc-CEACAM21-5
Ensembl Gene ID: ENSG00000268027
Ensembl Transcript ID: ENST00000595395
Location (hg19): chr19:42055888-42061832
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 599 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066471; ENST00000595395.1
Alternative gene names: ENSG00000268027.1; AC006129.2; ENSG00000268027.5; ; AC243960.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7829 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEACAM21-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf69-2:4
4.0 lnc-C19orf69-2:4
4.1 LINC01480:28
5.0 LINC01480:28
5.1 lnc-SHKBP1-21:4
5.2 lnc-CEACAM21-5:4