Transcript: lnc-CEBPD-11:6

Basic information

LNCipedia transcript ID: lnc-CEBPD-11:6 
LNCipedia gene ID: lnc-CEBPD-11
Location (hg19): chr8:48172293-48173385
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1093 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000102375.1|FTMT23000002075.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.294 non-coding 
CPAT coding probability 7.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEBPD-11:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-350F16.2.1-11:4
5.0 lnc-RP11-350F16.2.1-11:4
5.1 lnc-SFRP1-52:6
5.2 lnc-CEBPD-11:6