Transcript: lnc-CELSR1-2:2

Basic information

LNCipedia transcript ID: lnc-CELSR1-2:2 
LNCipedia gene ID: lnc-CELSR1-2
Location (hg19): chr22:46944610-46957576
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1287 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058838.1|MICT00000235531.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.1193 non-coding 
CPAT coding probability 6.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CELSR1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CELSR1-2:2
5.0 lnc-CELSR1-2:2
5.1 lnc-CERK-7:4
5.2 lnc-CELSR1-2:2