Transcript: lnc-CEP44-1:10

Basic information

LNCipedia transcript ID: lnc-CEP44-1:10 
LNCipedia gene ID: lnc-CEP44-1
Location (hg19): chr4:175443931-175462497
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8639 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071063.1|MICT00000274765.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.571 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP44-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CEP44-1:10
5.0 lnc-CEP44-1:10
5.1 lnc-GALNTL6-27:7
5.2 lnc-CEP44-1:10