Transcript: lnc-CEP57L1-1:6

Basic information

LNCipedia transcript ID: lnc-CEP57L1-1:6 
LNCipedia gene ID: lnc-CEP57L1-1
Location (hg19): chr6:109557817-109592217
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2259 bp
Exons: 11
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000534901
Alternative gene names: ENSG00000243587; C6orf183


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1292.6803 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CEP57L1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEP57L1-1:2
3.1 lnc-C6orf183-1:3
4.0 lnc-C6orf183-1:3
4.1 lnc-C6orf183-1:3
5.0 lnc-C6orf183-1:3
5.1 lnc-SMPD2-10:3
5.2 lnc-CEP57L1-1:6