Transcript: lnc-CEP95-1:4

Basic information

LNCipedia transcript ID: lnc-CEP95-1:4 
LNCipedia gene ID: lnc-CEP95-1
Location (hg19): chr17:63097174-63107018
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 426 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025465; NONHSAT055370
Alternative gene names: XLOC_012281; linc-RGS9-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.6134 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP95-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RGS9-1:9
3.1 lnc-RGS9-1:10
4.0 lnc-RGS9-1:10
4.1 lnc-RGS9-1:10
5.0 lnc-RGS9-1:10
5.1 lnc-TANC2-71:18
5.2 lnc-CEP95-1:4