Transcript: lnc-CFAP46-3:10

Basic information

LNCipedia transcript ID: lnc-CFAP46-3:10 
LNCipedia gene ID: lnc-CFAP46-3
Location (hg19): chr10:134824449-134825220
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018654; NONHSAT017106
Alternative gene names: XLOC_009007; linc-C10orf93-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CFAP46-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC40-3:6
3.1 lnc-TTC40-3:6
4.0 lnc-TTC40-3:6
4.1 lnc-TTC40-3:6
5.0 lnc-TTC40-3:6
5.1 lnc-CALY-17:10
5.2 lnc-CFAP46-3:10