Transcript: lnc-CFAP46-3:11

Basic information

LNCipedia transcript ID: lnc-CFAP46-3:11 
LNCipedia gene ID: lnc-CFAP46-3
Location (hg19): chr10:134824440-134825072
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 376 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018653; NONHSAT017105
Alternative gene names: XLOC_009007; linc-C10orf93-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CFAP46-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC40-3:7
3.1 lnc-TTC40-3:7
4.0 lnc-TTC40-3:7
4.1 lnc-TTC40-3:7
5.0 lnc-TTC40-3:7
5.1 lnc-CALY-17:11
5.2 lnc-CFAP46-3:11