Transcript: lnc-CHD2-4:10

Basic information

LNCipedia transcript ID: lnc-CHD2-4:10 
LNCipedia gene ID: lnc-CHD2-4
Location (hg19): chr15:94026417-94041974
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 267 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT050123; FPKM1_group_10872_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -203.0288 non-coding 
CPAT coding probability 2.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD2-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-4:10
4.0 lnc-CHD2-4:10
4.1 lnc-CHD2-4:10
5.0 lnc-CHD2-4:10
5.1 lnc-TTLL13P-78:21
5.2 lnc-CHD2-4:10