Transcript: lnc-CHD2-4:11

Basic information

LNCipedia transcript ID: lnc-CHD2-4:11 
LNCipedia gene ID: lnc-CHD2-4
Location (hg19): chr15:94073470-94076103
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 300 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT050125; FPKM1_group_10873_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.139 non-coding 
CPAT coding probability 7.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD2-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-4:11
4.0 lnc-CHD2-4:11
4.1 lnc-CHD2-4:11
5.0 lnc-CHD2-4:11
5.1 lnc-TTLL13P-78:23
5.2 lnc-CHD2-4:11