Transcript: lnc-CHD2-4:20

Basic information

LNCipedia transcript ID: lnc-CHD2-4:20 
LNCipedia gene ID: lnc-CHD2-4
Location (hg19): chr15:93856415-94041876
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257060.2|ENST00000556519.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -108.4589 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD2-4:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHD2-4:20
5.0 lnc-CHD2-4:20
5.1 lnc-TTLL13P-78:13
5.2 lnc-CHD2-4:20