Transcript: lnc-CHFR-3:3

Basic information

LNCipedia transcript ID: lnc-CHFR-3:3 
LNCipedia gene ID: lnc-CHFR-3
Location (hg19): chr12:133424741-133426546
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1423 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT032132
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.0589 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHFR-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLE-1:4
4.0 lnc-CHFR-3:3
4.1 lnc-CHFR-3:3
5.0 lnc-CHFR-3:3
5.1 lnc-ANKLE2-5:3
5.2 lnc-CHFR-3:3