Transcript: lnc-CHMP2B-2:7

Basic information

LNCipedia transcript ID: lnc-CHMP2B-2:7 
LNCipedia gene ID: lnc-CHMP2B-2
Location (hg19): chr3:86708205-86771837
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1516 bp
Exons: 7
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT090674; FPKM1_group_21537_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.1659 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHMP2B-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHMP2B-2:7
4.0 lnc-CHMP2B-2:7
4.1 lnc-CHMP2B-2:7
5.0 lnc-CHMP2B-2:7
5.1 lnc-CADM2-2:2
5.2 lnc-CHMP2B-2:7