Transcript: lnc-CHN2-4:4

Basic information

LNCipedia transcript ID: lnc-CHN2-4:4 
LNCipedia gene ID: lnc-CHN2-4
Ensembl Gene ID: ENSG00000285412
Ensembl Transcript ID: ENST00000588769
Location (hg19): chr7:29164671-29167783
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 695 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT119783; ENST00000588769.1
Alternative gene names: ENSG00000285412.1; AC005232.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.3075 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHN2-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHN2-4:4
4.0 lnc-CHN2-4:4
4.1 lnc-CHN2-4:4
5.0 lnc-CHN2-4:4
5.1 lnc-MTURN-28:6
5.2 lnc-CHN2-4:4