Transcript: lnc-CHST12-4:2

Basic information

LNCipedia transcript ID: lnc-CHST12-4:2 
LNCipedia gene ID: lnc-CHST12-4
Location (hg19): chr7:2443924-2454011
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2067 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT118797
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.7418 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST12-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF3B-4:2
4.0 lnc-CHST12-4:2
4.1 lnc-CHST12-4:2
5.0 lnc-CHST12-4:2
5.1 lnc-GPER1-56:2
5.2 lnc-CHST12-4:2