Transcript: lnc-CHST6-1:2

Basic information

LNCipedia transcript ID: lnc-CHST6-1:2 
LNCipedia gene ID: lnc-CHST6-1
Location (hg19): chr16:75492150-75494517
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1454 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261476.1|ENST00000563554.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.3016 non-coding 
CPAT coding probability 3.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST6-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CHST6-1:2
5.0 lnc-CHST6-1:2
5.1 lnc-MLKL-28:1
5.2 lnc-CHST6-1:2