Transcript: lnc-CHSY1-5:3

Basic information

LNCipedia transcript ID: lnc-CHSY1-5:3 
LNCipedia gene ID: lnc-CHSY1-5
Location (hg19): chr15:101453413-101459443
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3208 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499063
Alternative gene names: ENSG00000247392


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 148.0334 coding 
CPAT coding probability 7.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CHSY1-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHSY1-3:2
3.1 lnc-CHSY1-5:3
4.0 lnc-CHSY1-5:3
4.1 lnc-CHSY1-5:3
5.0 lnc-CHSY1-5:3
5.1 lnc-CIB1-110:13
5.2 lnc-CHSY1-5:3