Transcript: lnc-CIDEA-4:1

Basic information

LNCipedia transcript ID: lnc-CIDEA-4:1 
LNCipedia gene ID: lnc-CIDEA-4
Location (hg19): chr18:12278495-12281507
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1533_chr18:12278494-12281507_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.1928 non-coding 
CPAT coding probability 5.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CIDEA-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CIDEA-4:1
4.0 lnc-CIDEA-4:1
4.1 lnc-CIDEA-4:1
5.0 lnc-CIDEA-4:1
5.1 lnc-RIOK3-152:1
5.2 lnc-CIDEA-4:1