Transcript: lnc-CIR1-2:1

Basic information

LNCipedia transcript ID: lnc-CIR1-2:1 
LNCipedia gene ID: lnc-CIR1-2
Location (hg19): chr2:175164052-175165684
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1041 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT075554
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1565 non-coding 
CPAT coding probability 65.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CIR1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CIR1-2:1
4.0 lnc-CIR1-2:1
4.1 lnc-CIR1-2:1
5.0 lnc-CIR1-2:1
5.1 lnc-OLA1-6:1
5.2 lnc-CIR1-2:1