Transcript: lnc-CISD2-1:12

Basic information

LNCipedia transcript ID: lnc-CISD2-1:12 
LNCipedia gene ID: lnc-CISD2-1
RefSeq ID: NR_131185
Location (hg19): chr4:103750471-103765263
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1044 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131185.1
Alternative gene names: LOC105377348


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.8385 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CISD2-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C4orf17-39:12
5.1 lnc-C4orf17-39:12
5.2 lnc-CISD2-1:12