Transcript: lnc-CISD2-1:6

Basic information

LNCipedia transcript ID: lnc-CISD2-1:6 
LNCipedia gene ID: lnc-CISD2-1
Location (hg19): chr4:103749126-103765274
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1011 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246560.2|FTMT21500001593.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.8385 non-coding 
CPAT coding probability 2.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CISD2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CISD2-1:6
5.0 lnc-CISD2-1:6
5.1 lnc-C4orf17-39:5
5.2 lnc-CISD2-1:6