Transcript: lnc-CIT-11:2

Basic information

LNCipedia transcript ID: lnc-CIT-11:2 
LNCipedia gene ID: lnc-CIT-11
Location (hg19): chr12:119583076-119592395
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9320 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013557.1|ENCT00000107855.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 315.6558 coding 
CPAT coding probability 8.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CIT-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CIT-11:2
5.0 lnc-CIT-11:2
5.1 lnc-GCN1-16:5
5.2 lnc-CIT-11:2