Transcript: lnc-CIT-11:4

Basic information

LNCipedia transcript ID: lnc-CIT-11:4 
LNCipedia gene ID: lnc-CIT-11
Location (hg19): chr12:119574008-119592395
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3686 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013557.1|MICT00000087483.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.9935 non-coding 
CPAT coding probability 6.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CIT-11:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CIT-11:4
5.0 lnc-CIT-11:4
5.1 lnc-GCN1-16:3
5.2 lnc-CIT-11:4