Transcript: lnc-CKAP2L-1:11

Basic information

LNCipedia transcript ID: lnc-CKAP2L-1:11 
LNCipedia gene ID: lnc-CKAP2L-1
Location (hg19): chr2:113399313-113403286
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1340 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237753.1|HBMT00000813386.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -170.6666 non-coding 
CPAT coding probability 6.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CKAP2L-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CKAP2L-1:11
5.0 lnc-CKAP2L-1:11
5.1 lnc-EN1-53:4
5.2 lnc-CKAP2L-1:11