Transcript: lnc-CKAP2L-2:4

Basic information

LNCipedia transcript ID: lnc-CKAP2L-2:4 
LNCipedia gene ID: lnc-CKAP2L-2
Location (hg19): chr2:113347595-113389253
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1277 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237753.1|FTMT20500081215.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.286 non-coding 
CPAT coding probability 9.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CKAP2L-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CKAP2L-2:4
5.0 lnc-CKAP2L-2:4
5.1 lnc-EN1-54:1
5.2 lnc-CKAP2L-2:4