Transcript: lnc-CLASP2-1:10

Basic information

LNCipedia transcript ID: lnc-CLASP2-1:10 
LNCipedia gene ID: lnc-CLASP2-1
Location (hg19): chr3:33823606-33840482
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11383 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271643.1|ENCT00000301737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.4503 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLASP2-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLASP2-1:10
5.0 lnc-CLASP2-1:10
5.1 lnc-OSBPL10-30:3
5.2 lnc-CLASP2-1:10