Transcript: lnc-CLDN10-9:2

Basic information

LNCipedia transcript ID: lnc-CLDN10-9:2 
LNCipedia gene ID: lnc-CLDN10-9
Location (hg19): chr13:95926217-95940124
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13142 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000015791.1|MICT00000097750.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.347 non-coding 
CPAT coding probability 1.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN10-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLDN10-9:2
5.0 lnc-CLDN10-9:2
5.1 lnc-COL4A2-138:4
5.2 lnc-CLDN10-9:2