Transcript: lnc-CLDN11-6:1

Basic information

LNCipedia transcript ID: lnc-CLDN11-6:1 
LNCipedia gene ID: lnc-CLDN11-6
Location (hg19): chr3:170588109-170588525
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 417 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000062783.1|FTMT21200008634.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -148.3631 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN11-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLDN11-6:1
5.0 lnc-CLDN11-6:1
5.1 lnc-LRRIQ4-26:1
5.2 lnc-CLDN11-6:1