Transcript: lnc-CLDN23-1:4

Basic information

LNCipedia transcript ID: lnc-CLDN23-1:4 
LNCipedia gene ID: lnc-CLDN23-1
Location (hg19): chr8:8412783-8435105
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8111 bp
Exons: 8
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT124878; FPKM1_group_30830_transcript_6
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.1916 non-coding 
CPAT coding probability 3.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN23-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLDN23-1:4
4.0 lnc-CLDN23-1:4
4.1 lnc-CLDN23-1:4
5.0 lnc-CLDN23-1:4
5.1 lnc-DEFB106A-14:6
5.2 lnc-CLDN23-1:4