Transcript: lnc-CLDN6-4:4

Basic information

LNCipedia transcript ID: lnc-CLDN6-4:4 
LNCipedia gene ID: lnc-CLDN6-4
Location (hg19): chr16:3022814-3023603
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 717 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT147895
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.9252 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN6-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLDN6-4:4
4.0 lnc-CLDN6-4:4
4.1 lnc-CLDN6-4:4
5.0 lnc-CLDN6-4:4
5.1 lnc-SEPT12-54:4
5.2 lnc-CLDN6-4:4