Transcript: lnc-CLEC2D-11:1

Basic information

LNCipedia transcript ID: lnc-CLEC2D-11:1 
LNCipedia gene ID: lnc-CLEC2D-11
Location (hg19): chr12:9913606-9914127
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 522 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007937.1|FTMT24800000581.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -81.477 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC2D-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLEC2D-11:1
5.0 lnc-CLEC2D-11:1
5.1 lnc-A2ML1-16:1
5.2 lnc-CLEC2D-11:1