Transcript: lnc-CLEC2D-1:2

Basic information

LNCipedia transcript ID: lnc-CLEC2D-1:2 
LNCipedia gene ID: lnc-CLEC2D-1
Ensembl Gene ID: ENSG00000257027
Ensembl Transcript ID: ENST00000537616
Location (hg19): chr12:9811163-9814681
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2508 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537616.1; RP11-705C15.3-001; OTTHUMT00000399756.1; NONHSAT026845
Alternative gene names: ENSG00000257027.1; RP11-705C15.3; OTTHUMG00000168442.1; AC010186.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.5482 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC2D-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLRF1-1:1
4.0 lnc-KLRF1-1:1
4.1 lnc-KLRF1-1:1
5.0 lnc-KLRF1-1:1
5.1 lnc-A2ML1-14:1
5.2 lnc-CLEC2D-1:2