Transcript: lnc-CLEC3B-3:3

Basic information

LNCipedia transcript ID: lnc-CLEC3B-3:3 
LNCipedia gene ID: lnc-CLEC3B-3
Location (hg19): chr3:45096789-45123876
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1001 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059950.1|MICT00000241440.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.1372 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC3B-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLEC3B-3:3
5.0 lnc-CLEC3B-3:3
5.1 lnc-RTP3-41:2
5.2 lnc-CLEC3B-3:3